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1
The impact of learning Unified Medical Language System knowledge embeddings in relation extraction from biomedical texts
In: J Am Med Inform Assoc (2020)
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2
A supervised framework for resolving coreference in clinical records
Rink, Bryan; Roberts, Kirk; Harabagiu, Sanda M. - : BMJ Publishing Group Ltd, 2012
Abstract: Objective A method for the automatic resolution of coreference between medical concepts in clinical records. Materials and methods A multiple pass sieve approach utilizing support vector machines (SVMs) at each pass was used to resolve coreference. Information such as lexical similarity, recency of a concept mention, synonymy based on Wikipedia redirects, and local lexical context were used to inform the method. Results were evaluated using an unweighted average of MUC, CEAF, and B3 coreference evaluation metrics. The datasets used in these research experiments were made available through the 2011 i2b2/VA Shared Task on Coreference. Results The method achieved an average F score of 0.821 on the ODIE dataset, with a precision of 0.802 and a recall of 0.845. These results compare favorably to the best-performing system with a reported F score of 0.827 on the dataset and the median system F score of 0.800 among the eight teams that participated in the 2011 i2b2/VA Shared Task on Coreference. On the i2b2 dataset, the method achieved an average F score of 0.906, with a precision of 0.895 and a recall of 0.918 compared to the best F score of 0.915 and the median of 0.859 among the 16 participating teams. Discussion Post hoc analysis revealed significant performance degradation on pathology reports. The pathology reports were characterized by complex synonymy and very few patient mentions. Conclusion The use of several simple lexical matching methods had the most impact on achieving competitive performance on the task of coreference resolution. Moreover, the ability to detect patients in electronic medical records helped to improve coreference resolution more than other linguistic analysis.
Keyword: Research and applications
URL: https://doi.org/10.1136/amiajnl-2012-000810
http://jamia.bmj.com/cgi/content/short/amiajnl-2012-000810v1
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3
A Machine Learning Approach for Identifying Anatomical Locations of Actionable Findings in Radiology Reports
Roberts, Kirk; Rink, Bryan; Harabagiu, Sanda M.. - : American Medical Informatics Association, 2012
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4
Statistical and Similarity Methods for Classifying Emotion in Suicide Notes
Roberts, Kirk; Harabagiu, Sanda M.. - : Libertas Academica, 2012
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5
Unsupervised event coreference resolution with rich linguistic features
In: Association for Computational Linguistics. Proceedings of the conference. - Stroudsburg, Penn. : ACL 48 (2010) 2, 1412-1422
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6
Question answering
In: The Oxford handbook of computational linguistics (New York, 2009), p. 560-582
MPI für Psycholinguistik
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7
Advances in open domain question answering
Harabagiu, Sanda M. (Hrsg.); Strzalkowski, Tomek (Hrsg.). - Dordrecht : Springer, 2006
BLLDB
UB Frankfurt Linguistik
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8
Open-domain textual question answering techniques
In: Natural language engineering. - Cambridge : Cambridge University Press 9 (2003) 3, 231-267
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9
Answer Mining from On-Line Documents
In: DTIC (2001)
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10
The Role of Lexico-Semantic Feedback in Open-Domain Textual Question-Answering
In: Thirty-Ninth Annual Meeting of the Association for Computational Linguistics (ACL), 2001, Toulouse, France (2001)
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11
Natural language processing and knowledge representation : language for knowledge and knowledge for language
McRoy, Susan W. (Mitarb.); Kruger, Kellyn (Mitarb.); Shapiro, Stuart Charles (Hrsg.). - Menlo Park, Calif. [u.a.] : AAA Press [u.a.], 2000
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UB Frankfurt Linguistik
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12
Enriching the WordNet taxonomy with contextual knowledge acquired from text
In: Natural language processing and knowledge representation (Cambridge, Mass), p. 301-334
MPI für Psycholinguistik
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13
The Structure and Performance of an Open-Domain Question Answering System
In: Thirty-Eighth Annual Meeting of the Association for Computational Linguistics (ACL), 2000, Hong Kong, PRC China (2000)
BASE
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14
Wordnet-based inference of textual context, cohesion and coherence
Harabagiu, Sanda M.. - Ann Arbor : UMI, 1999
IDS Mannheim
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15
Knowledge processing on an extended WordNet
In: WordNet (Cambridge, Mass, 1998), p. 379-406
MPI für Psycholinguistik
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16
Applications of WordNet
Landes, Shari (Mitarb.); Leacock, Claudia (Mitarb.); Tengi, Randee I. (Mitarb.)...
In: Wordnet. - Cambridge, Mass. [u.a.] : MIT Press (1998), 197-405
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17
Knowledge representation for natural language processing
In: Natural language engineering. - Cambridge : Cambridge University Press 3 (1997) 2-3, 97-253
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